Spatio-temporal genetic tagging of a cosmopolitan planktivorous shark provides insight to gene flow, temporal variation and site-specific re-encounters

Lilian Lieber, University of Aberdeen
Graham Hall, Manx Basking Shark Watch
Jackie Hall, Manx Basking Shark Watch
Simon Berrow, Irish Basking Shark Study Group
Emmett Johnston, Irish Basking Shark Study Group
Chrysoula Gubili, University of Aberdeen
Jane Sarginson, University of Aberdeen
Malcolm Francis, National Institute of Water and Atmospheric Research, New Zealand
Clinton Duffy, Te Papa Atawhai
Sabine P. Wintner, Natal Sharks Board
Philip D. Doherty, University of Exeter
Brendan J. Godley, University of Exeter
Lucy A. Hawkes, University of Exeter
Matthew J. Witt, University of Exeter
Suzanne M. Henderson, Scottish Natural Heritage
Eleonora de Sabata, MedSharks
Mahmood S. Shivji, University of North Florida
Deborah A. Dawson, The University of Sheffield
David W. Sims, Marine Biological Association
Catherine S. Jones, University of Aberdeen
Leslie R. Noble, University of Aberdeen

Abstract

Migratory movements in response to seasonal resources often influence population structure and dynamics. Yet in mobile marine predators, population genetic consequences of such repetitious behaviour remain inaccessible without comprehensive sampling strategies. Temporal genetic sampling of seasonally recurring aggregations of planktivorous basking sharks, Cetorhinus maximus, in the Northeast Atlantic (NEA) affords an opportunity to resolve individual re-encounters at key sites with population connectivity and patterns of relatedness. Genetic tagging (19 microsatellites) revealed 18% of re-sampled individuals in the NEA demonstrated inter/multi-annual site-specific re-encounters. High genetic connectivity and migration between aggregation sites indicate the Irish Sea as an important movement corridor, with a contemporary effective population estimate (Ne) of 382 (CI = 241–830). We contrast the prevailing view of high gene flow across oceanic regions with evidence of population structure within the NEA, with early-season sharks off southwest Ireland possibly representing genetically distinct migrants. Finally, we found basking sharks surfacing together in the NEA are on average more related than expected by chance, suggesting a genetic consequence of, or a potential mechanism maintaining, site-specific re-encounters. Long-term temporal genetic monitoring is paramount in determining future viability of cosmopolitan marine species, identifying genetic units for conservation management, and for understanding aggregation structure and dynamics.